ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fhdA1 - ECOD Domain | ECOD

ECOD/Domains/e5fhdA1

e5fhdA1

UID: 001807065

PDB

Range: A:189-247,A:356-432
PDB: 5FHD chain A(all domains)
UniProt: D1JM21 (all domains)

Molecule: Uncharacterized protein

3D Structure

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Related Domains

Browse other domains in Viral_helicase1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyViral_helicase1(2004.1.1.62)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Tetrafluoroaluminate IonALF
drugDrugBank DB04444

Pfam Families

PF01443Viral_helicase1

Viral superfamily 1 RNA helicase core domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5FHD RCSB PDB: 5FHD PDBe: 5FHD UniProt: D1JM21

Downloads

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Magnesium ion

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.