ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5i1rA1 - ECOD Domain | ECOD

ECOD/Domains/e5i1rA1

e5i1rA1

UID: 001807243

PDB

Range: A:378-409
PDB: 5I1R chain A(all domains)
UniProt: P04591 (all domains)
Gene: gag

Molecule: Gag polyprotein (Pr55Gag) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide 1 (SP1) (p2); Nucleocapsid protein p7 (NC); Spacer peptide 2 (SP2) (p1); p6-gag]

3D Structure

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Related Domains

Browse other domains in zf-CCHC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupCCHC-type 1 zinc finger(396)

HH-groupRetrovirus zinc finger-related domains(396.1)

TT-groupRetrovirus zinc finger-related domains(396.1.1)

FFamilyzf-CCHC(396.1.1.1)

Pfam Families

PF00098zf-CCHC

Zinc knuckle

ClanCL0511Retroviral_zf

External Links

ECOD PDB View: 5I1R RCSB PDB: 5I1R PDBe: 5I1R UniProt: P04591

Downloads

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