ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ipmF2 - ECOD Domain | ECOD

ECOD/Domains/e5ipmF2

e5ipmF2

UID: 001807338

PDB

Range: F:53-167
PDB: 5IPM chain F(all domains)
UniProt: P13445 (all domains)
Gene: rpoS

Molecule: RNA polymerase sigma factor RpoS (Sigma S) (Sigma-38)

3D Structure

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Related Domains

Browse other domains in Sigma70_r1_2,Sigma70_r2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSigma2 domain-like(142)

HH-groupSigma2 domain of RNA polymerase sigma factors(142.1)

TT-groupSigma2 domain of RNA polymerase sigma factors(142.1.1)

FFamilySigma70_r1_2,Sigma70_r2(142.1.1.1)

Pfam Families

PF00140Sigma70_r1_2

Sigma-70 factor, region 1.2

PF04542Sigma70_r2

Sigma-70 region 2

ClanCL0123HTH

External Links

ECOD PDB View: 5IPM RCSB PDB: 5IPM PDBe: 5IPM UniProt: P13445

Downloads

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