ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r0qA1 - ECOD Domain | ECOD

ECOD/Domains/e4r0qA1

e4r0qA1

UID: 001812449

PDB

Range: A:679-808
PDB: 4R0Q chain A(all domains)
UniProt: C8W8H7 (all domains)
Gene: Apar_1344

Molecule: Peptidoglycan glycosyltransferase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019)

HH-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1)

TT-groupalpha-helical domain in beta-lactamase/transpeptidase-like proteins(4019.1.1)

FFamilyTranspeptidase(4019.1.1.3)

Ligands

in contact, ≤ 4 Å

2-[3-(2-Hydroxy-1,1-Dihydroxymethyl-Ethylamino)-Propylamino]-2-Hydroxymethyl-Propane-1,3-DiolB3P
drugDrugBank DB02676
Cephalothin GroupCEP
drug

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4R0Q RCSB PDB: 4R0Q PDBe: 4R0Q UniProt: C8W8H7

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03450

Thiocyanate ionSCN

Shown in the structure viewer. Drug annotations from DrugDomain.