ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4r0qB2 - ECOD Domain | ECOD

ECOD/Domains/e4r0qB2

e4r0qB2

UID: 001812453

PDB

Range: B:615-678,B:809-950
PDB: 4R0Q chain B(all domains)
UniProt: C8W8H7 (all domains)
Gene: Apar_1344

Molecule: Peptidoglycan glycosyltransferase

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Ligands

in contact, ≤ 4 Å

Cephalothin GroupCEP
drugDrugBank DB03450

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 4R0Q RCSB PDB: 4R0Q PDBe: 4R0Q UniProt: C8W8H7

Downloads

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