ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1k25D4 - ECOD Domain | ECOD

ECOD/Domains/e1k25D4

e1k25D4

UID: 001814007

PDB

Range: D:3264-3333,D:3456-3612
PDB: 1K25 chain D(all domains)
UniProt: O34006 (all domains)
Gene: pbp2X

Molecule: Low-affinity penicillin-binding protein 2X

3D Structure

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Related Domains

Browse other domains in Transpeptidase →

Classification

AArchitecturea+b three layers(a.12)

XX-groupProfilin-like(223)

HH-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3)

TT-groupa+b domain in beta-lactamase/transpeptidase-like proteins(223.3.1)

FFamilyTranspeptidase(223.3.1.3)

Pfam Families

PF00905Transpeptidase

Penicillin binding protein transpeptidase domain

ClanCL0013Beta-lactamase

External Links

ECOD PDB View: 1K25 RCSB PDB: 1K25 PDBe: 1K25 UniProt: O34006

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