ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5dckB1 - ECOD Domain | ECOD

ECOD/Domains/e5dckB1

e5dckB1

UID: 001822074

PDB

Range: B:141-212
PDB: 5DCK chain B(all domains)
UniProt: P16087 (all domains)
Gene: gag

Molecule: Gag polyprotein [Cleaved into: Matrix protein p15 (MA); Capsid protein p24 (CA); p1; Nucleocapsid protein p13 (NC)]

3D Structure

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Related Domains

Browse other domains in Gag_p24_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupRetrovirus capsid protein(170)

HH-groupRetrovirus capsid protein-C(170.1)

TT-groupRetrovirus capsid protein-C(170.1.1)

FFamilyGag_p24_C(170.1.1.5)

Pfam Families

PF19317Gag_p24_C

Gag protein p24 C-terminal domain

ClanCL0148Viral_Gag

External Links

ECOD PDB View: 5DCK RCSB PDB: 5DCK PDBe: 5DCK UniProt: P16087

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