ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ebmC1 - ECOD Domain | ECOD

ECOD/Domains/e5ebmC1

e5ebmC1

UID: 001822116

PDB

Range: C:24-124
PDB: 5EBM chain C(all domains)
UniProt: P0A334 (all domains)
Gene: kcsA

Molecule: pH-gated potassium channel KcsA

3D Structure

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Related Domains

Browse other domains in Ion_trans_2 →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupVoltage-gated ion channels(5054)

HH-groupVoltage-gated ion channels(5054.1)

TT-groupVoltage-gated ion channels(5054.1.1)

FFamilyIon_trans_2(5054.1.1.8)

Ligands

in contact, ≤ 4 Å

Nonan-1-OlF09
drugDrugBank DB03143
Diacyl glycerolDGA
Potassium ionK
metal

Pfam Families

PF07885Ion_trans_2

Ion channel

ClanCL0030Ion_channel

External Links

ECOD PDB View: 5EBM RCSB PDB: 5EBM PDBe: 5EBM UniProt: P0A334

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.