ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5ep1A2 - ECOD Domain | ECOD

ECOD/Domains/e5ep1A2

e5ep1A2

UID: 001822147

PDB

Range: A:141-307
PDB: 5EP1 chain A(all domains)
UniProt: Q1ZS18 (all domains)
Gene: VAS14_05548

Molecule: Putative repressor protein luxO

3D Structure

Loading viewer...

Related Domains

Browse other domains in Sigma54_activat →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySigma54_activat(2004.1.1.22)

Pfam Families

PF00158Sigma54_activat

Sigma-54 interaction domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5EP1 RCSB PDB: 5EP1 PDBe: 5EP1 UniProt: Q1ZS18

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure