ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2cw8A4 - ECOD Domain | ECOD

ECOD/Domains/e2cw8A4

e2cw8A4

UID: 001822581

PDB

Range: A:1-123,A:497-537
PDB: 2CW8 chain A(all domains)
UniProt: P77933 (all domains)
Gene: pol

Molecule: Endonuclease PI-PkoII

3D Structure

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Related Domains

Browse other domains in Intein_splicing →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupHedgehog/intein(69)

HH-groupHedgehog/intein(69.1)

TT-groupHint(69.1.1)

FFamilyIntein_splicing(69.1.1.4)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14890Intein_splicing

Intein splicing domain

ClanCL0363H-int

External Links

ECOD PDB View: 2CW8 RCSB PDB: 2CW8 PDBe: 2CW8 UniProt: P77933

Downloads

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