ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1z2zB1 - ECOD Domain | ECOD

ECOD/Domains/e1z2zB1

e1z2zB1

UID: 001822853

PDB

Range: B:1-168,B:389-437
PDB: 1Z2Z chain B(all domains)
UniProt: Q8Q0M2 (all domains)
Gene: truD

Molecule: Probable tRNA pseudouridine synthase D (EC 5.4.99.27) (tRNA pseudouridine(13) synthase) (tRNA pseudouridylate synthase D) (tRNA-uridine isomerase D)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupPseudouridine synthase(304.102)

TT-groupPseudouridine synthase(304.102.1)

FFamilyTruD(304.102.1.2)

Pfam Families

tRNA pseudouridine synthase D (TruD)

ClanCL0649PseudoU_synth

External Links

ECOD PDB View: 1Z2Z RCSB PDB: 1Z2Z PDBe: 1Z2Z UniProt: Q8Q0M2

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