ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5elyA2 - ECOD Domain | ECOD

ECOD/Domains/e5elyA2

e5elyA2

UID: 001824462

PDB

Range: A:55-117,A:351-593
PDB: 5ELY chain A(all domains)
UniProt: Q04609 (all domains)
Gene: FOLH1

Molecule: Glutamate carboxypeptidase 2

3D Structure

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Related Domains

Browse other domains in Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M28(2011.1.1.8)

Ligands

in contact, ≤ 4 Å

N-AcetylglucosamineNAG
drugDrugBank DB00141
4-[(2~{R})-2-carboxy-5-(oxidanylamino)-5-oxidanylidene-pentyl]benzoic acid5PU
Calcium ionCA

Pfam Families

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 5ELY RCSB PDB: 5ELY PDBe: 5ELY UniProt: Q04609

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Chloride ionCL

Zinc ionZN

metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.