ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5a0mA1 - ECOD Domain | ECOD

ECOD/Domains/e5a0mA1

e5a0mA1

UID: 001827047

PDB

Range: A:421-526
PDB: 5A0M chain A(all domains)
UniProt: P03882 (all domains)
Gene: SCEI

Molecule: Intron-encoded endonuclease I-SceI (EC 3.1.-.-) (21S rRNA intron maturase) (Homing endonuclease omega)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LAGLIDADG_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupHoming endonucleases-like(242)

HH-groupHoming endonucleases(242.1)

TT-groupHoming endonucleases(242.1.1)

FFamilyLAGLIDADG_2(242.1.1.2)

Pfam Families

PF03161LAGLIDADG_2

LAGLIDADG DNA endonuclease family

ClanCL0324Homing_endonuc

External Links

ECOD PDB View: 5A0M RCSB PDB: 5A0M PDBe: 5A0M UniProt: P03882

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure