ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c0fA2 - ECOD Domain | ECOD

ECOD/Domains/e5c0fA2

e5c0fA2

UID: 001827177

PDB

Range: A:0-181
PDB: 5C0F chain A(all domains)
UniProt: P04439 (all domains)
Gene: HLA-A

Molecule: HLA class I histocompatibility antigen, A-2 alpha chain

3D Structure

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Related Domains

Browse other domains in MHC_I →

Classification

AArchitecturea+b two layers(a.11)

XX-groupMHC antigen-recognition domain(233)

HH-groupMHC antigen-recognition domain(233.1)

TT-groupMHC antigen-recognition domain(233.1.1)

FFamilyMHC_I(233.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Acetic acid, Glycerin, Sulfate ion, …)

Acetic acidACY
DrugBank DB03166
GlycerinGOL
DrugBank DB09462
Sulfate ion

Pfam Families

Class I Histocompatibility antigen, domains alpha 1 and 2

ClanCL0343MHC

External Links

ECOD PDB View: 5C0F RCSB PDB: 5C0F PDBe: 5C0F UniProt: P04439

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.