ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5c2yB1 - ECOD Domain | ECOD

ECOD/Domains/e5c2yB1

e5c2yB1

UID: 001827192

PDB

Range: B:1-166
PDB: 5C2Y chain B(all domains)
UniProt: P40084 (all domains)
Gene: RTR1

Molecule: RNA polymerase II subunit B1 CTD phosphatase RTR1 (EC 3.1.3.16) (RNA polymerase II-associated protein 2 homolog RTR1) (Regulator of transcription 1)

3D Structure

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Related Domains

Browse other domains in RPAP2_Rtr1 →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRegulator of transcription protein Rtr1(3371)

HH-groupRegulator of transcription protein Rtr1(3371.1)

TT-groupRegulator of transcription protein Rtr1(3371.1.1)

FFamilyRPAP2_Rtr1(3371.1.1.1)

Pfam Families

PF04181RPAP2_Rtr1

Rtr1/RPAP2 family

External Links

ECOD PDB View: 5C2Y RCSB PDB: 5C2Y PDBe: 5C2Y UniProt: P40084

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