ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hr4J1 - ECOD Domain | ECOD

ECOD/Domains/e5hr4J1

e5hr4J1

UID: 001828357

RepresentativePDB

Range: J:156-300
PDB: 5HR4 chain J(all domains)
UniProt: B2MU09 (all domains)
Gene: mmeIRM

Molecule: MmeI

3D Structure

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Related Domains

Browse other domains in MmeI_hel →

Classification

AArchitecturealpha arrays(a.6)

XX-groupN-terminal helical domain in restriction-modification system methylation subunit-like(3962)

HH-groupN-terminal helical domain in restriction-modification system methylation subunit(3962.1)

TT-groupN-terminal helical domain in restriction-modification system methylation subunit(3962.1.1)

FFamilyMmeI_hel(3962.1.1.2)

Ligands

in contact, ≤ 4 Å

SinefunginSFG
drugDrugBank DB01910
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF20465MmeI_hel

MmeI, helicase spacer domain

ClanCL0884MmeI_HD-like

External Links

ECOD PDB View: 5HR4 RCSB PDB: 5HR4 PDBe: 5HR4 UniProt: B2MU09

Downloads

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