ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jdfA1 - ECOD Domain | ECOD

ECOD/Domains/e5jdfA1

e5jdfA1

UID: 001828961

PDB

Range: A:1-301
PDB: 5JDF chain A(all domains)
UniProt: Q57556 (all domains)
Gene: MJ0091

Molecule: Uncharacterized membrane protein MJ0091

3D Structure

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Related Domains

Browse other domains in Na_Ca_ex →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSodium/Calcium exchanger(3745)

HH-groupSodium/Calcium exchanger(3745.1)

TT-groupSodium/Calcium exchanger(3745.1.1)

FFamilyNa_Ca_ex(3745.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
PentadecaneMYS
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC

Pfam Families

PF01699Na_Ca_ex

Sodium/calcium exchanger protein

External Links

ECOD PDB View: 5JDF RCSB PDB: 5JDF PDBe: 5JDF UniProt: Q57556

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.