ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jdnA1 - ECOD Domain | ECOD

ECOD/Domains/e5jdnA1

e5jdnA1

UID: 001828966

PDB

Range: A:1-301
PDB: 5JDN chain A(all domains)
UniProt: Q57556 (all domains)
Gene: MJ0091

Molecule: sodium-calcium exchanger NCX_Mj

3D Structure

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Related Domains

Browse other domains in Na_Ca_ex →

Classification

AArchitecturealpha bundles(a.7)

XX-groupSodium/Calcium exchanger(3745)

HH-groupSodium/Calcium exchanger(3745.1)

TT-groupSodium/Calcium exchanger(3745.1.1)

FFamilyNa_Ca_ex(3745.1.1.1)

Ligands

in contact, ≤ 4 Å

PentadecaneMYS
Sodium ionNA
metal
(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoateOLC
Strontium ion

Pfam Families

PF01699Na_Ca_ex

Sodium/calcium exchanger protein

External Links

ECOD PDB View: 5JDN RCSB PDB: 5JDN PDBe: 5JDN UniProt: Q57556

Downloads

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metal

+ 1 additive (Pentaethylene glycol)

Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.