ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5b43A6 - ECOD Domain | ECOD

ECOD/Domains/e5b43A6

e5b43A6

UID: 001830960

RepresentativePDB

Range: A:320-526
PDB: 5B43 chain A(all domains)
UniProt: U2UMQ6 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cas12a (EC 3.1.21.1) (EC 4.6.1.22) (AsCpf1) (CRISPR-associated endonuclease Cpf1)

3D Structure

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Related Domains

Browse other domains in cas_Cpf1_2nd →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071)

HH-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1)

TT-groupCRISPR-associated endonuclease Cpf1 second helical domain(1071.1.1)

FFamilycas_Cpf1_2nd(1071.1.1.1)

Pfam Families

PF21918cas_Cpf1_2nd

CRISPR-associated endonuclease Cpf1 REC2 domain

External Links

ECOD PDB View: 5B43 RCSB PDB: 5B43 PDBe: 5B43 UniProt: U2UMQ6

Downloads

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