ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5iy8I2 - ECOD Domain | ECOD

ECOD/Domains/e5iy8I2

e5iy8I2

UID: 001831697

PDB

Range: I:60-125
PDB: 5IY8 chain I(all domains)
UniProt: P36954 (all domains)
Gene: POLR2I

Molecule: DNA-directed RNA polymerase II subunit RPB9 (RNA polymerase II subunit B9) (DNA-directed RNA polymerase II subunit I) (RNA polymerase II 14.5 kDa subunit) (RPB14.5)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TFIIS_C →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupRubredoxin-like(375)

HH-groupRubredoxin-related(375.1)

TT-groupRubredoxin-related(375.1.1)

FFamilyTFIIS_C(375.1.1.7)

Pfam Families

PF01096Zn_ribbon_TFIIS

Transcription factor S-II (TFIIS)

ClanCL0167Zn_Beta_Ribbon

External Links

ECOD PDB View: 5IY8 RCSB PDB: 5IY8 PDBe: 5IY8 UniProt: P36954

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure