ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5iydK1 - ECOD Domain | ECOD

ECOD/Domains/e5iydK1

e5iydK1

UID: 001831918

PDB

Range: K:1-117
PDB: 5IYD chain K(all domains)
UniProt: P52435 (all domains)
Gene: POLR2J

Molecule: DNA-directed RNA polymerase II subunit RPB11-a (RNA polymerase II subunit B11-a) (RPB11a) (DNA-directed RNA polymerase II subunit J-1) (RNA polymerase II 13.3 kDa subunit)

3D Structure

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Related Domains

Browse other domains in RNA_pol_L_2 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDCoH-like(305)

HH-groupRBP11-like subunits of RNA polymerase(305.1)

TT-groupRBP11-like subunits of RNA polymerase(305.1.1)

FFamilyRNA_pol_L_2(305.1.1.2)

Pfam Families

PF13656RNA_pol_L_2

RNA polymerase Rpb3/Rpb11 dimerisation domain

ClanCL0509RBP11-like

External Links

ECOD PDB View: 5IYD RCSB PDB: 5IYD PDBe: 5IYD UniProt: P52435

Downloads

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