ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5iydM2 - ECOD Domain | ECOD

ECOD/Domains/e5iydM2

e5iydM2

UID: 001831921

PDB

Range: M:68-208
PDB: 5IYD chain M(all domains)
UniProt: Q00403 (all domains)
Gene: GTF2B

Molecule: Transcription initiation factor IIB (EC 2.3.1.48) (General transcription factor TFIIB) (S300-II)

3D Structure

Loading viewer...

Related Domains

Browse other domains in TFIIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupCyclin-like(101.1.10)

FFamilyTFIIB(101.1.10.3)

Pfam Families

Transcription factor TFIIB repeat

ClanCL0065Cyclin

External Links

ECOD PDB View: 5IYD RCSB PDB: 5IYD PDBe: 5IYD UniProt: Q00403

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure