ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gimC1 - ECOD Domain | ECOD

ECOD/Domains/e4gimC1

e4gimC1

UID: 001833269

PDB

Range: C:6-310
PDB: 4GIM chain C(all domains)
UniProt: P33025 (all domains)
Gene: psuG

Molecule: Pseudouridine-5'-phosphate glycosidase

3D Structure

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Related Domains

Browse other domains in Indigoidine_A →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupIndigoidine synthase A-like (Pfam 04227)(7549)

HH-groupIndigoidine synthase A-like (Pfam 04227)(7549.1)

TT-groupIndigoidine synthase A-like (Pfam 04227)(7549.1.1)

FFamilyIndigoidine_A(7549.1.1.1)

Ligands

in contact, ≤ 4 Å

Pseudouridine-5'-MonophosphatePSU
drugDrugBank DB03829
MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF04227Indigoidine_A

Indigoidine synthase A like protein

External Links

ECOD PDB View: 4GIM RCSB PDB: 4GIM PDBe: 4GIM UniProt: P33025

Downloads

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