ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5d80f1 - ECOD Domain | ECOD

ECOD/Domains/e5d80f1

e5d80f1

UID: 001841287

PDB

Range: f:384-486
PDB: 5D80 chain f(all domains)
UniProt: P16140 (all domains)
Gene: VMA2

Molecule: V-type proton ATPase subunit B (V-ATPase subunit B) (V-ATPase 57 kDa subunit) (Vacuolar proton pump subunit B)

3D Structure

Loading viewer...

Related Domains

Browse other domains in ATP-synt_VA_C →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160)

HH-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160.1)

TT-groupC-terminal domain of alpha and beta subunits of F1 ATP synthase(160.1.1)

FFamilyATP-synt_VA_C(160.1.1.4)

Pfam Families

PF22919ATP-synt_VA_C

C-terminal domain of V and A type ATP synthase

External Links

ECOD PDB View: 5D80 RCSB PDB: 5D80 PDBe: 5D80 UniProt: P16140

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure