ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5hlvF1 - ECOD Domain | ECOD

ECOD/Domains/e5hlvF1

e5hlvF1

UID: 001841460

PDB

Range: F:1-88
PDB: 5HLV chain F(all domains)
UniProt: P05109 (all domains)
Gene: S100A8

Molecule: Protein S100-A8

3D Structure

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Related Domains

Browse other domains in S_100 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupEF-hand-related(108.1)

TT-groupEF-hand(108.1.1)

FFamilyS_100(108.1.1.8)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Chloride ionCL
Zinc ionZN

Pfam Families

S-100/ICaBP type calcium binding domain

ClanCL0220EF_hand

External Links

ECOD PDB View: 5HLV RCSB PDB: 5HLV PDBe: 5HLV UniProt: P05109

Downloads

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metal

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer. Drug annotations from DrugDomain.