ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5l3qC1 - ECOD Domain | ECOD

ECOD/Domains/e5l3qC1

e5l3qC1

UID: 001841669

PDB

Range: C:91-296
PDB: 5L3Q chain C(all domains)
UniProt: P61011 (all domains)
Gene: SRP54

Molecule: Signal recognition particle subunit SRP54 (EC 3.6.5.4) (Signal recognition particle 54 kDa protein)

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5L3Q RCSB PDB: 5L3Q PDBe: 5L3Q UniProt: P61011

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure