ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5jmcB1 - ECOD Domain | ECOD

ECOD/Domains/e5jmcB1

e5jmcB1

UID: 001842263

PDB

Range: B:476-566
PDB: 5JMC chain B(all domains)
UniProt: Q9Z2I6 (all domains)
Gene: Sv2c

Molecule: Synaptic vesicle glycoprotein 2C (Synaptic vesicle protein 2C)

3D Structure

Loading viewer...

Related Domains

Browse other domains in LD_SV2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPentapeptide repeats(207.9)

TT-groupPentapeptide repeats(207.9.1)

FFamilyLD_SV2(207.9.1.5)

Pfam Families

SV2A/B/C luminal domain

ClanCL0505Pentapeptide

External Links

ECOD PDB View: 5JMC RCSB PDB: 5JMC PDBe: 5JMC UniProt: Q9Z2I6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure