ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ajkC1 - ECOD Domain | ECOD

ECOD/Domains/e4ajkC1

e4ajkC1

UID: 001851372

PDB

Range: C:160-331
PDB: 4AJK chain C(all domains)
UniProt: P04642 (all domains)
Gene: Ldha

Molecule: L-LACTATE DEHYDROGENASE A CHAIN

3D Structure

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Related Domains

Browse other domains in Ldh_1_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLDH C-terminal domain-like(279)

HH-groupLDH C-terminal domain-like(279.1)

TT-groupLDH C-terminal domain-like(279.1.1)

FFamilyLdh_1_C(279.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Malonate Ion, Glycerin)

Malonate IonMLI
DrugBank DB02201
GlycerinGOL
DrugBank DB09462within 5 Å only

Shown in the structure viewer.

Pfam Families

PF02866Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

ClanCL0341LDH_C

External Links

ECOD PDB View: 4AJK RCSB PDB: 4AJK PDBe: 4AJK UniProt: P04642

Downloads

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Drug annotations from DrugDomain.