ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4mdhB3 - ECOD Domain | ECOD

ECOD/Domains/e4mdhB3

e4mdhB3

UID: 001852617

PDB

Range: B:154-333
PDB: 4MDH chain B(all domains)
UniProt: P11708 (all domains)
Gene: MDH1

Molecule: CYTOPLASMIC MALATE DEHYDROGENASE

3D Structure

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Related Domains

Browse other domains in Ldh_1_C →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupLDH C-terminal domain-like(279)

HH-groupLDH C-terminal domain-like(279.1)

TT-groupLDH C-terminal domain-like(279.1.1)

FFamilyLdh_1_C(279.1.1.1)

Ligands

in contact, ≤ 4 Å

NadideNAD
drugDrugBank DB14128

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

PF02866Ldh_1_C

lactate/malate dehydrogenase, alpha/beta C-terminal domain

ClanCL0341LDH_C

External Links

ECOD PDB View: 4MDH RCSB PDB: 4MDH PDBe: 4MDH UniProt: P11708

Downloads

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Drug annotations from DrugDomain.