ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3mzkB1 - ECOD Domain | ECOD

ECOD/Domains/e3mzkB1

e3mzkB1

UID: 000185416

RepresentativePDB

Range: B:988-1390
PDB: 3MZK chain B(all domains)
UniProt: P48415 (all domains)
Gene: SEC16

Molecule: COPII coat assembly protein SEC16 (Protein transport protein SEC16)

3D Structure

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Related Domains

Browse other domains in Sec16_C,Sec16 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21)

TT-groupNucleoporin NUP85/Nucleoporin NUP145 C-terminal domain(109.21.1)

FFamilySec16_C,Sec16(109.21.1.4)

Pfam Families

PF12931TPR_Sec16

Sec16 Sec23-binding domain

ClanCL0020TPR

Vesicle coat trafficking protein Sec16 mid-region

External Links

ECOD PDB View: 3MZK RCSB PDB: 3MZK PDBe: 3MZK UniProt: P48415

Downloads

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