ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3sooB1 - ECOD Domain | ECOD

ECOD/Domains/e3sooB1

e3sooB1

UID: 000185539

RepresentativePDB

Range: B:235-319
PDB: 3SOO chain B(all domains)
UniProt: Q5T7N2 (all domains)
Gene: L1TD1

Molecule: LINE-1 type transposase domain-containing protein 1 (Embryonic stem cell-associated protein 11) (ES cell-associated protein 11)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Tnp_22_dsRBD →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupC-terminal domain in LINE-1 ORF1p(330.9)

TT-groupC-terminal domain in LINE-1 ORF1p(330.9.1)

FFamilyTnp_22_dsRBD(330.9.1.1)

Pfam Families

PF17490Tnp_22_dsRBD

L1 transposable element dsRBD-like domain

External Links

ECOD PDB View: 3SOO RCSB PDB: 3SOO PDBe: 3SOO UniProt: Q5T7N2

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure