ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5fnyB1 - ECOD Domain | ECOD

ECOD/Domains/e5fnyB1

e5fnyB1

UID: 001855690

PDB

Range: B:67-220
PDB: 5FNY chain B(all domains)
UniProt: P69506 (all domains)
Gene: ytfE

Molecule: IRON-SULFUR CLUSTER REPAIR PROTEIN YTFE

3D Structure

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Related Domains

Browse other domains in Hemerythrin →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupHemerythrin(601.14)

TT-groupHemerythrin(601.14.1)

FFamilyHemerythrin(601.14.1.1)

Ligands

in contact, ≤ 4 Å

FE (III) IONFE
metal
Oxygen atomO
Zinc ionZN

Pfam Families

PF01814Hemerythrin

Hemerythrin HHE cation binding domain

External Links

ECOD PDB View: 5FNY RCSB PDB: 5FNY PDBe: 5FNY UniProt: P69506

Downloads

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metal

+ 1 additive (Nonaethylene glycol)

Nonaethylene glycol2PE

Shown in the structure viewer. Drug annotations from DrugDomain.