ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3jd5E2 - ECOD Domain | ECOD

ECOD/Domains/e3jd5E2

e3jd5E2

UID: 001866064

PDB

Range: E:216-286
PDB: 3JD5 chain E(all domains)
UniProt: Q2KID9 (all domains)
Gene: MRPS5

Molecule: Small ribosomal subunit protein uS5m (28S ribosomal protein S5, mitochondrial) (MRP-S5) (S5mt)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupdsRBD-like(330)

HH-groupdsRNA-binding domain-like(330.1)

TT-groupdsRNA-binding domain-like(330.1.1)

FFamilyRibosomal_S5(330.1.1.2)

Pfam Families

PF00333Ribosomal_S5

Ribosomal protein S5, N-terminal domain

ClanCL0196DSRM

External Links

ECOD PDB View: 3JD5 RCSB PDB: 3JD5 PDBe: 3JD5 UniProt: Q2KID9

Downloads

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