ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jduD1 - ECOD Domain | ECOD

ECOD/Domains/e5jduD1

e5jduD1

UID: 001866315

PDB

Range: D:16-245
PDB: 5JDU chain D(all domains)
UniProt: P00734 (all domains)
Gene: F2

Molecule: Thrombin heavy chain

3D Structure

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Related Domains

Browse other domains in Trypsin →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupFMN-binding split barrel 2(1.1.17)

FFamilyTrypsin(1.1.17.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00089Trypsin

Trypsin

ClanCL0124Peptidase_PA

External Links

ECOD PDB View: 5JDU RCSB PDB: 5JDU PDBe: 5JDU UniProt: P00734

Downloads

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