ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5k8fB1 - ECOD Domain | ECOD

ECOD/Domains/e5k8fB1

e5k8fB1

UID: 001866545

PDB

Range: B:543-681
PDB: 5K8F chain B(all domains)
UniProt: J9VFT1 (all domains)
Gene: CNAG_00797

Molecule: Acetyl-coenzyme A synthetase (EC 6.2.1.1)

3D Structure

Loading viewer...

Related Domains

Browse other domains in AMP-binding_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-lytic protease prodomain-like(327)

HH-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5)

TT-groupa+b domain in acetyl-CoA synthetase-like proteins(327.5.1)

FFamilyAMP-binding_C(327.5.1.2)

Pfam Families

PF13193AMP-binding_C

AMP-binding enzyme C-terminal domain

ClanCL0531AMP-binding_C

External Links

ECOD PDB View: 5K8F RCSB PDB: 5K8F PDBe: 5K8F UniProt: J9VFT1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure