ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5kewB1 - ECOD Domain | ECOD

ECOD/Domains/e5kewB1

e5kewB1

UID: 001870509

RepresentativePDB

Range: B:31-161
PDB: 5KEW chain B(all domains)
UniProt: Q87GI3 (all domains)
Gene: VPA1333

Molecule: VtrC Protein

3D Structure

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Related Domains

Browse other domains in VtrC →

Classification

AArchitecturebeta barrels(a.1)

XX-groupLipocalins/Streptavidin(9)

HH-groupLipocalins(9.1)

TT-groupLipocalins(9.1.1)

FFamilyVtrC(9.1.1.31)

Ligands

in contact, ≤ 4 Å

Taurodeoxycholate6SB

+ 2 additives (Acetate, Sulfate ion)

AcetateACT
DrugBank DB14511
Sulfate ionSO4

Pfam Families

VtrC lipocalin-like domain

ClanCL0116Calycin

External Links

ECOD PDB View: 5KEW RCSB PDB: 5KEW PDBe: 5KEW UniProt: Q87GI3

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.