ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5dkuB2 - ECOD Domain | ECOD

ECOD/Domains/e5dkuB2

e5dkuB2

UID: 001870769

PDB

Range: B:425-542
PDB: 5DKU chain B(all domains)
UniProt: Q8ILY1 (all domains)
Gene: PREX

Molecule: Plastidic DNA replication/repair enzyme complex (PfPrex) (EC 2.7.7.102) (EC 2.7.7.7) (EC 3.1.11.-) (EC 5.6.2.3) (Apicoplast DNA polymerase) (apPOL) (Plastid replication-repair enzyme)

3D Structure

Loading viewer...

Related Domains

Browse other domains in DNA_pol_A →

Classification

AArchitecturealpha arrays(a.6)

XX-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964)

HH-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1)

TT-grouphelical bundle in Bacillus stearothermophilus-like DNA polymerase I(4964.1.1)

FFamilyDNA_pol_A(4964.1.1.1)

Pfam Families

PF00476DNA_pol_A

DNA polymerase family A

External Links

ECOD PDB View: 5DKU RCSB PDB: 5DKU PDBe: 5DKU UniProt: Q8ILY1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure