ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jneA3 - ECOD Domain | ECOD

ECOD/Domains/e5jneA3

e5jneA3

UID: 001870959

PDB

Range: A:453-527
PDB: 5JNE chain A(all domains)
UniProt: Q04195 (all domains)
Gene: SIZ1

Molecule: E3 SUMO-protein ligase SIZ1 (EC 2.3.2.-) (E3 SUMO-protein transferase SIZ2) (SAP and Miz-finger domain-containing protein 1) (Ubiquitin-like protein ligase 1)

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupUbiquitin-related(221.1)

TT-groupUbiquitin-like(221.1.1)

FFamilyRad60-SLD(221.1.1.44)

Pfam Families

PF11976Rad60-SLD

Ubiquitin-2 like Rad60 SUMO-like

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5JNE RCSB PDB: 5JNE PDBe: 5JNE UniProt: Q04195

Downloads

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