ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5jneE1 - ECOD Domain | ECOD

ECOD/Domains/e5jneE1

e5jneE1

UID: 001870960

PDB

Range: E:173-314
PDB: 5JNE chain E(all domains)
UniProt: Q04195 (all domains)
Gene: SIZ1

Molecule: E3 SUMO-protein ligase SIZ1 (EC 2.3.2.-) (E3 SUMO-protein transferase SIZ2) (SAP and Miz-finger domain-containing protein 1) (Ubiquitin-like protein ligase 1)

3D Structure

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Related Domains

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Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupGalactose-binding domain-like(10.32)

TT-groupGalactose-binding domain-like(10.32.1)

FFamilyPINIT(10.32.1.42)

Pfam Families

PINIT domain

ClanCL0202GBD

External Links

ECOD PDB View: 5JNE RCSB PDB: 5JNE PDBe: 5JNE UniProt: Q04195

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