ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dmgB2 - ECOD Domain | ECOD

ECOD/Domains/e4dmgB2

e4dmgB2

UID: 001873099

PDB

Range: B:71-385
PDB: 4DMG chain B(all domains)
UniProt: Q5SI81 (all domains)
Gene: RlmO

Molecule: Ribosomal RNA large subunit methyltransferase I (EC 2.1.1.-) (23S rRNA m5C1942 methyltransferase) (rRNA (cytosine-C(5)-)-methyltransferase RlmI)

3D Structure

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Related Domains

Browse other domains in Methyltrans_SAM →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyMethyltrans_SAM(2003.1.5.74)

Pfam Families

PF10672Methyltrans_SAM

S-adenosylmethionine-dependent methyltransferase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4DMG RCSB PDB: 4DMG PDBe: 4DMG UniProt: Q5SI81

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