ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3dsdB2 - ECOD Domain | ECOD

ECOD/Domains/e3dsdB2

e3dsdB2

UID: 001873109

PDB

Range: B:272-333
PDB: 3DSD chain B(all domains)
UniProt: Q8U1N9 (all domains)
Gene: mre11

Molecule: DNA double-strand break repair protein Mre11 (EC 3.1.-.-) (pfMre11)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Mre11_2nd →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMre11 nuclease C-terminal domain(3979)

HH-groupMre11 nuclease C-terminal domain(3979.1)

TT-groupMre11 nuclease C-terminal domain(3979.1.1)

FFamilyMre11_2nd(3979.1.1.4)

Pfam Families

PF22411Mre11_2nd

Mre11 nuclease, second domain

External Links

ECOD PDB View: 3DSD RCSB PDB: 3DSD PDBe: 3DSD UniProt: Q8U1N9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure