ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4rifA1 - ECOD Domain | ECOD

ECOD/Domains/e4rifA1

e4rifA1

UID: 001874533

PDB

Range: A:200-373
PDB: 4RIF chain A(all domains)
UniProt: Q9ZGC0 (all domains)
Gene: lanGT2

Molecule: Glycosyl transferase homolog

3D Structure

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Related Domains

Browse other domains in EryCIII-like_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512)

HH-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1)

TT-groupUDP-Glycosyltransferase/glycogen phosphorylase(7512.1.1)

FFamilyEryCIII-like_C(7512.1.1.20)

Ligands

in contact, ≤ 4 Å

2'-deoxy-5'-O-[(R)-{[(R)-{[(1S,3R,4R,5S)-3,4-dihydroxy-5-methylcyclohexyl]oxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-3,4-dihydrothymidine3R2

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF06722EryCIII-like_C

Erythromycin biosynthesis protein CIII-like, C-terminal domain

ClanCL0113GT-B

External Links

ECOD PDB View: 4RIF RCSB PDB: 4RIF PDBe: 4RIF UniProt: Q9ZGC0

Downloads

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