ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2xgjB4 - ECOD Domain | ECOD

ECOD/Domains/e2xgjB4

e2xgjB4

UID: 001875141

RepresentativePDB

Range: B:578-671,B:810-873
PDB: 2XGJ chain B(all domains)
UniProt: P47047 (all domains)
Gene: MTR4

Molecule: ATP-dependent RNA helicase DOB1 (EC 3.6.4.13) (mRNA transport regulator MTR4)

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupHelical arch in Ski2-like helicases(3324)

HH-groupHelical arch in Ski2-like helicases(3324.1)

TT-groupHelical arch in Ski2-like helicases(3324.1.1)

FFamily(3324.1.1.2)

Pfam Families

PF13234MTR4_beta-barrel

Mtr4-like, beta-barrel domain

ClanCL0010SH3

PF21408MTR4-like_stalk

Exosome RNA helicase MTR4-like, stalk

External Links

ECOD PDB View: 2XGJ RCSB PDB: 2XGJ PDBe: 2XGJ UniProt: P47047

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