ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5a0vB1 - ECOD Domain | ECOD

ECOD/Domains/e5a0vB1

e5a0vB1

UID: 001875483

PDB

Range: B:2-211,B:376-452
PDB: 5A0V chain B(all domains)
UniProt: O86842 (all domains)
Gene: rnj

Molecule: Ribonuclease J (RNase J) (EC 3.1.-.-)

3D Structure

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Related Domains

Browse other domains in RMMBL,Lactamase_B_2 →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyRMMBL,Lactamase_B_2(247.1.1.18)

Pfam Families

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

PF12706Lactamase_B_2

Beta-lactamase superfamily domain

ClanCL0381Metallo-HOrase

External Links

ECOD PDB View: 5A0V RCSB PDB: 5A0V PDBe: 5A0V UniProt: O86842

Downloads

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