ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ds3A1 - ECOD Domain | ECOD

ECOD/Domains/e5ds3A1

e5ds3A1

UID: 001877392

PDB

Range: A:797-1010
PDB: 5DS3 chain A(all domains)
UniProt: P09874 (all domains)
Gene: PARP1

Molecule: Poly [ADP-ribose] polymerase 1

3D Structure

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Related Domains

Browse other domains in PARP →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupADP-ribosylation(237)

HH-groupADP-ribosylation(237.1)

TT-groupADP-ribosylation(237.1.1)

FFamilyPARP(237.1.1.1)

Ligands

in contact, ≤ 4 Å

Olaparib09L
drugDrugBank DB09074

+ 2 additives (Sulfate ion, Pentaethylene glycol)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Poly(ADP-ribose) polymerase catalytic domain

ClanCL0084ADP-ribosyl

External Links

ECOD PDB View: 5DS3 RCSB PDB: 5DS3 PDBe: 5DS3 UniProt: P09874

Downloads

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Pentaethylene glycol1PE

Shown in the structure viewer. Drug annotations from DrugDomain.