ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3zq4D3 - ECOD Domain | ECOD

ECOD/Domains/e3zq4D3

e3zq4D3

UID: 001878319

PDB

Range: D:6-200,D:367-450
PDB: 3ZQ4 chain D(all domains)
UniProt: Q45493 (all domains)
Gene: rnjA

Molecule: Ribonuclease J1 (RNase J1) (EC 3.1.-.-)

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lactamase_B,RMMBL →

Classification

AArchitecturea+b four layers(a.13)

XX-groupMetallo-hydrolase/oxidoreductase(247)

HH-groupMetallo-hydrolase/oxidoreductase(247.1)

TT-groupMetallo-hydrolase/oxidoreductase(247.1.1)

FFamilyLactamase_B,RMMBL(247.1.1.2)

Pfam Families

PF00753Lactamase_B

Metallo-beta-lactamase superfamily

ClanCL0381Metallo-HOrase

Zn-dependent metallo-hydrolase RNA specificity domain

ClanCL0398RMMBL_DRMBL

External Links

ECOD PDB View: 3ZQ4 RCSB PDB: 3ZQ4 PDBe: 3ZQ4 UniProt: Q45493

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure