ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j09C1 - ECOD Domain | ECOD

ECOD/Domains/e5j09C1

e5j09C1

UID: 001878981

PDB

Range: C:46-239
PDB: 5J09 chain C(all domains)
UniProt: A0A023R6W2 (all domains)
Gene: Cap

Molecule: Capsid protein

3D Structure

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Related Domains

Browse other domains in Circo_capsid →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyCirco_capsid(10.2.1.29)

Pfam Families

PF02443Circo_capsid

Circovirus capsid protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5J09 RCSB PDB: 5J09 PDBe: 5J09 UniProt: A0A023R6W2

Downloads

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