ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j6rB1 - ECOD Domain | ECOD

ECOD/Domains/e5j6rB1

e5j6rB1

UID: 001879565

PDB

Range: B:20-404,B:439-473
PDB: 5J6R chain B(all domains)
UniProt: Q81971 (all domains)
Gene: ORF

Molecule: Major capsid protein L1

3D Structure

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Related Domains

Browse other domains in Late_protein_L1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2)

TT-groupNucleoplasmin-like/VP (viral coat and capsid proteins)(10.2.1)

FFamilyLate_protein_L1(10.2.1.4)

Pfam Families

PF00500Late_protein_L1

L1 (late) protein

ClanCL0055Nucleoplasmin

External Links

ECOD PDB View: 5J6R RCSB PDB: 5J6R PDBe: 5J6R UniProt: Q81971

Downloads

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