ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2yorA1 - ECOD Domain | ECOD

ECOD/Domains/e2yorA1

e2yorA1

UID: 001881966

PDB

Range: A:5-137
PDB: 2YOR chain A(all domains)
UniProt: B9W4V6 (all domains)
Gene: APO1

Molecule: AROMATIC PEROXYGENASE

3D Structure

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Related Domains

Browse other domains in Peroxidase_2 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupEF-hand(108)

HH-groupCloroperoxidase(108.3)

TT-groupCloroperoxidase(108.3.1)

FFamilyPeroxidase_2(108.3.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
N-AcetylglucosamineNAG
drugDrugBank DB00141

Pfam Families

PF01328Peroxidase_2

Peroxidase, family 2

External Links

ECOD PDB View: 2YOR RCSB PDB: 2YOR PDBe: 2YOR UniProt: B9W4V6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

beta-D-mannopyranose

Chloride ionCL

Magnesium ionMG

metal

1H-imidazol-5-ylmethanolMZ0

+ 1 additive (Sulfate ion)

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.