ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5imyB2 - ECOD Domain | ECOD

ECOD/Domains/e5imyB2

e5imyB2

UID: 001883541

PDB

Range: B:405-515
PDB: 5IMY chain B(all domains)
UniProt: B2YGA4 (all domains)
Gene: VLY

Molecule: Vaginolysin

3D Structure

Loading viewer...

Related Domains

Browse other domains in Thiol_cytolys_C →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupPerfringolysin O beta sandwich domain(11.15)

TT-groupPerfringolysin O beta sandwich domain(11.15.1)

FFamilyThiol_cytolys_C(11.15.1.1)

Pfam Families

PF17440Thiol_cytolys_C

Thiol-activated cytolysin beta sandwich domain

External Links

ECOD PDB View: 5IMY RCSB PDB: 5IMY PDBe: 5IMY UniProt: B2YGA4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure